Galaxy-GSA

--A set of GSA tools in a Galaxy environment--

Posted by Antonio Mora on July 20, 2021

Announcement:

Galaxy-GSA logo

We are pleased to announce the introduction of Galaxy-GSA, a group of GSA tools for different types of scenarios inside a Galaxy platform:

Galaxy-GSA homepage

Galaxy-GSA is a group of GSA tools wrapped in a Galaxy platform. Each Galaxy-GSA tool gives visibility to all the software options, parameters, and help from the original packages, so the user can leverage Galaxy’s simple and reproducible infrastructure to upload data, format data, choose parameters and options through a simple interface, and send results to the history to allow comparisons between different runs, communication between tools, and communication with all other Galaxy tools.

Screenshots:

Galaxy-GSA screenshot

Fig 1. Galaxy-GSA user interface (example: Reactome Pathway Analysis tool) –Data input.

Galaxy-GSA screenshot

Fig 2. Galaxy-GSA user interface (example: Reactome Pathway Analysis tool) –Results.

Galaxy-GSA screenshot

Fig 3. Galaxy-GSA virtual machine (zenodo page).

Update:

References:

Galaxy-GSA has been introduced in the following publication:

[1] HUANG, X., (2022), Placeholder, Journal of placeholders, 1, 1, https://doi.org/10.1093/bib/bbz090